PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G055100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 346aa    MW: 38782.2 Da    PI: 10.0389
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G055100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix55.91.1e-1716104185
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                         +Wt++e + Li ++++++++l+r++l++ +We v++++          ++++qC++k+e+l+kry+++k++ + +  +  st+ +f+ +
  Prupe.5G055100.1.p  16 CWTNDEAQGLISIYKDTWSALGRSNLRASDWETVAAALasrcPLVSPPKTAIQCRHKMEKLRKRYRNEKQRGSTHPGRFLSTWDLFRPM 104
                         8************************************95332233448899***********************999999999999877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-1715104No hitNo description
PROSITE profilePS500906.1441777IPR017877Myb-like domain
SMARTSM005953.2E-524112IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAAPPQPKPR KFPPPCWTND EAQGLISIYK DTWSALGRSN LRASDWETVA AALASRCPLV  60
SPPKTAIQCR HKMEKLRKRY RNEKQRGSTH PGRFLSTWDL FRPMFDLECE APALFGSDPD  120
RETRVGVQFG RGFRVRKDEI VRYLAESDQN LSDPDEETWK GAGFRGGFRV NVGVRGKGGE  180
NSSFSAGFDR YVSRGNDEAR GFPVKSSGDR NLGPSEFGSK SYGKTCNEKF SPKRNLKRDC  240
SYGAGTKSGF YKKFRGGLDS DGVGKEVEDP IGQMASSVEF MGEVFLKMEK KKMEMARDIV  300
KMRMEMEMRQ NELIMESQKQ VLAACVDALL ESKKKKKMKV VSSDS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210734.10.0hypothetical protein PRUPE_ppa021742mg, partial
TrEMBLM5WRK30.0M5WRK3_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF137971421
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.16e-27Trihelix family protein